Publications & Works

Publication Network

Published journal articles indexed by SCI, SSCI, and AHCI

Investigation of class 1 integrons and virulence genes in the emergent Salmonella serovar Infantis in Turkey

Namli S. , Soyer Y.
INTERNATIONAL MICROBIOLOGY, vol.25, no.2, pp.259-265, 2022 (Journal Indexed in SCI) identifier identifier identifier

Microbial growth and attachment of Salmonella and enterohemorrhagic and enteroaggregative Escherichia coli strains on cress microgreens grown in peat soil system

Namli S. , Samut H. , Soyer Y.
BRITISH FOOD JOURNAL, 2021 (Journal Indexed in SCI) Sustainable Development identifier identifier

The effect of polyacid on the physical and biological properties of chitosan based layer-by-layer films

Saracogullari N., GÜNDOĞDU D. , ÖZDEMİR F. N. , SOYER Y. , EREL GÖKTEPE İ.
COLLOIDS AND SURFACES A-PHYSICOCHEMICAL AND ENGINEERING ASPECTS, vol.617, 2021 (Journal Indexed in SCI) identifier identifier

Effect of Non-LAB Probiotics on Foodborne Enteric Pathogens: A Systematic Review

Yeni F. , Samut H. , Soyer Y.
Food Reviews International, 2021 (Journal Indexed in SCI) identifier identifier

Genome analysis of antimicrobial resistance, virulence, and plasmid presence in Turkish Salmonella serovar Infantis isolates

Acar S., Bulut E., Stasiewicz M. J. , SOYER Y.
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, vol.307, 2019 (Journal Indexed in SCI) Sustainable Development identifier identifier identifier

Isolation and molecular characterization of Salmonella enterica and Escherichia coli from poultry samples

Cesur A., Ulutas S. O. , Soyer Y.
TURKISH JOURNAL OF VETERINARY & ANIMAL SCIENCES, vol.43, no.3, pp.408-422, 2019 (Journal Indexed in SCI) Sustainable Development identifier identifier

Cinnamon oil nanoemulsions by spontaneous emulsification: Formulation, characterization and antimicrobial activity

YILDIRIM S. T. , Oztop M. H. , SOYER Y.
LWT-FOOD SCIENCE AND TECHNOLOGY, vol.84, pp.122-128, 2017 (Journal Indexed in SCI) identifier identifier

Phenotyping and genetic characterization of Salmonella enterica isolates from Turkey revealing arise of different features specific to geography

Acar S., Bulut E., Durul B., Uner I., Kur M., AVŞAROĞLU ERKAN M. D. , et al.
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, vol.241, pp.98-107, 2017 (Journal Indexed in SCI) Sustainable Development identifier identifier identifier

Recent Outbreaks of Human Pathogens on Plants (HPOPs) on Fresh Produce - Lessons Learned from the Practice

ALPAS H. , Yeni F., SOYER Y. , Fletcher J.
PRACTICAL TOOLS FOR PLANT AND FOOD BIOSECURITY: RESULTS FROM A EUROPEAN NETWORK OF EXCELLENCE, VOL 8, vol.8, pp.77-96, 2017 (Journal Indexed in SCI) Sustainable Development identifier

How can we improve foodborne disease surveillance systems: A comparison through EU and US systems

Yenı F., Acar S. , Soyer Y. , Alpas H.
FOOD REVIEWS INTERNATIONAL, vol.33, pp.406-423, 2017 (Journal Indexed in SCI) Sustainable Development identifier identifier

Vulnerabilities, Threats and Gaps in Food Biosecurity

Fletcher J., ALPAS H. , Henry C. M. , Haynes E., Dehne H. W. , Ma L. M. , et al.
PRACTICAL TOOLS FOR PLANT AND FOOD BIOSECURITY: RESULTS FROM A EUROPEAN NETWORK OF EXCELLENCE, VOL 8, vol.8, pp.61-75, 2017 (Journal Indexed in SCI) Sustainable Development identifier

Microorganisms Found in MPR and Packaged Produce and Their Detection Methods

Acar S. Y. , SOYER Y.
MINIMALLY PROCESSED REFRIGERATED FRUITS AND VEGETABLES, 2ND EDITION, pp.653-684, 2017 (Journal Indexed in SCI) identifier

Most Common Foodborne Pathogens and Mycotoxins on Fresh Produce: A Review of Recent Outbreaks

Yeni F., Yavaş S., Alpas H. , Soyer Y.
CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION, vol.56, pp.1532-1544, 2016 (Journal Indexed in SCI) Sustainable Development identifier identifier identifier

Subtyping of Salmonella Food Isolates Suggests the Geographic Clustering of Serotype Telaviv

Durul B., Acar S., Bulut E., Kyere E. O. , SOYER Y.
FOODBORNE PATHOGENS AND DISEASE, vol.12, no.12, pp.958-965, 2015 (Journal Indexed in SCI) identifier identifier identifier

Molecular evaluation and antimicrobial susceptibility testing of Escherichia coli isolates from food products in Turkey

Kyere E. O. , Bulut E., AVŞAROĞLU ERKAN M. D. , SOYER Y.
FOOD SCIENCE AND BIOTECHNOLOGY, vol.24, no.3, pp.1001-1009, 2015 (Journal Indexed in SCI) identifier identifier

Salmonella surveillance on fresh produce in retail in Turkey

Gunel E., Kilic G. P. , Bulut E., Durul B., Acar S., Alpas H. , et al.
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, vol.199, pp.72-77, 2015 (Journal Indexed in SCI) identifier identifier identifier

Rapid and standardized methods for detection of foodborne pathogens and mycotoxins on fresh produce

YENI F., ACAR S. , POLAT Ö., SOYER Y. , ALPAS H.
FOOD CONTROL, vol.40, pp.359-367, 2014 (Journal Indexed in SCI) identifier identifier

Antimicrobial Drug Resistance Patterns among Cattle- and Human-Associated Salmonella Strains

SOYER Y. , Richards J., Hoelzer K., Warnick L. D. , Fortes E., McDonough P., et al.
JOURNAL OF FOOD PROTECTION, vol.76, no.10, pp.1676-1688, 2013 (Journal Indexed in SCI) identifier identifier identifier

The Prevalence of Multidrug Resistance Is Higher among Bovine than Human Salmonella enterica Serotype Newport, Typhimurium, and 4,5,12:i:- Isolates in the United States but Differs by Serotype and Geographic Region

Hoelzer K., Soyer Y. , Rodriguez-Rivera L. D. , Cummings K. J. , McDonough P. L. , Schoonmaker-Bopp D. J. , et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol.76, no.17, pp.5947-5959, 2010 (Journal Indexed in SCI) Creative Commons License Sustainable Development identifier identifier identifier

Development and validation of a resistance and virulence gene microarray targeting Escherichia coli and Salmonella enterica

Davis M. A. , Lim J. Y. , Soyer Y. , Harbottle H., Chang Y., New D., et al.
JOURNAL OF MICROBIOLOGICAL METHODS, vol.82, no.1, pp.36-41, 2010 (Journal Indexed in SCI) Creative Commons License identifier identifier identifier

Pulsed-Field Gel Electrophoresis Diversity of Human and Bovine Clinical Salmonella Isolates

Soyer Y. , Alcaine S. D. , Schoonmaker-Bopp D. J. , Root T. P. , Warnick L. D. , McDonough P. L. , et al.
FOODBORNE PATHOGENS AND DISEASE, vol.7, no.6, pp.707-717, 2010 (Journal Indexed in SCI) Creative Commons License Sustainable Development identifier identifier identifier

Genome wide evolutionary analyses reveal serotype specific patterns of positive selection in selected Salmonella serotypes

Soyer Y. , Orsi R. H. , Rodriguez-Rivera L. D. , Sun Q., Wiedmann M.
BMC EVOLUTIONARY BIOLOGY, vol.9, 2009 (Journal Indexed in SCI) Creative Commons License identifier identifier identifier

Salmonella enterica Serotype 4,5,12:i:-, an Emerging Salmonella Serotype That Represents Multiple Distinct Clones

Soyer Y. , Switt A. M. , Davis M. A. , Maurer J., McDonough P. L. , Schoonmaker-Bopp D. J. , et al.
JOURNAL OF CLINICAL MICROBIOLOGY, vol.47, no.11, pp.3546-3556, 2009 (Journal Indexed in SCI) Creative Commons License identifier identifier identifier

Fecal shedding of, antimicrobial resistance in, and serologic response to SalmonellaTyphimurium in dairy calves

Alexander K. A. , Warnick L. D. , Cripps C. J. , McDonough P. L. , Grohn Y. T. , Wiedmann M., et al.
JAVMA-JOURNAL OF THE AMERICAN VETERINARY MEDICAL ASSOCIATION, vol.235, no.6, pp.739-748, 2009 (Journal Indexed in SCI) identifier identifier identifier

Multilocus Variable-Number Tandem-Repeat Method for Typing Salmonella enterica Serovar Newport

Davis M. A. , Baker K. N. K. , Call D. R. , Warnick L. D. , Soyer Y. , Wiedmann M., et al.
JOURNAL OF CLINICAL MICROBIOLOGY, vol.47, no.6, pp.1934-1938, 2009 (Journal Indexed in SCI) Creative Commons License Sustainable Development identifier identifier identifier

Emergence, Distribution, and Molecular and Phenotypic Characteristics of Salmonella enterica Serotype 4,5,12:i:-

Switt A. I. M. , Soyer Y. , Warnick L. D. , Wiedmann M.
FOODBORNE PATHOGENS AND DISEASE, vol.6, no.4, pp.407-415, 2009 (Journal Indexed in SCI) Creative Commons License Sustainable Development identifier identifier identifier

Assessing genetic heterogeneity within bacterial species isolated from gastrointestinal and environmental samples: How many isolates does it take?

Dopfer D., Buist W., Soyer Y. , Munoz M. A. , Zadoks R. N. , Geue L., et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol.74, no.11, pp.3490-3496, 2008 (Journal Indexed in SCI) Creative Commons License identifier identifier identifier

Multidrug-resistant Salmonella typhimurium, Pacific Northwest, United States

Davis M. A. , Besser T. E. , Eckmann K., MacDonald J. K. , Green D., Hancock D. D. , et al.
EMERGING INFECTIOUS DISEASES, vol.13, no.10, pp.1583-1586, 2007 (Journal Indexed in SCI) identifier identifier identifier

Multilocus sequence typing supports the hypothesis that cow- and human-associated Salmonella isolates represent distinct and overlapping populations

Alcaine S. D. , Soyer Y. , Warnick L. D. , Su W. -. , Sukhnanand S., Richards J., et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol.72, no.12, pp.7575-7585, 2006 (Journal Indexed in SCI) identifier identifier identifier

Antioxidant activity of selected fruits and vegetables grown in Turkey

Karadeniz F., Burdurlu H. S. , Koca N., Soyer Y.
Turkish Journal of Agriculture and Forestry, vol.29, no.4, pp.297-303, 2005 (Journal Indexed in SCI Expanded) identifier

Organic acid profile of Turkish white grapes and grape juices

Soyer Y. , Koca N., Karadeniz F.
JOURNAL OF FOOD COMPOSITION AND ANALYSIS, vol.16, no.5, pp.629-636, 2003 (Journal Indexed in SCI) identifier identifier

Articles Published in Other Journals

Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015

GÜZEL M., Avşaroğlu M. D. , SOYER Y.
Food and Health, vol.6, no.3, pp.160-169, 2020 (Other Refereed National Journals)

Microbial Control of Milk and Milk Products

Guzel M., SOYER Y.
MICROBIAL CONTROL AND FOOD PRESERVATION: THEORY AND PRACTICE, pp.255-280, 2017 (Refereed Journals of Other Institutions) Sustainable Development identifier identifier identifier

Refereed Congress / Symposium Publications in Proceedings

Tarçın Yağı ile Hazırlanmış Mikroemülsiyon Nanoemülsiyonların Karakterizasyonu ve Antimikrobiyel Etkisnin İncelenmesi

Yıldırım S. T. , SOYER Y. , ÖZTOP H. M.
5. Gıda Güvenliği Kongresi, Turkey, 7 - 08 May 2015

Comparative Genomic Analysis of 5 fully Sequenced Salmonella Genomes

SOYER Y. , Orsi R., Sun Q., Wiedmann M.
Annual Meeting of the American Society of Microbiology, Toronto, Canada, 21 - 25 May 2007

Books & Book Chapters

Microbial Control of Milk and Milk Products

Güzel M., Soyer Y.
in: Microbial Control and Food Preservation, V.K. Juneja,H.P. Dwivedi and J.N. SofV.K. Juneja,H.P. Dwivedi and J.N. Sofos, Editor, Springer, London/Berlin , Washington, pp.255-280, 2017

Microorganisms Found in MPR and Packaged Produce and Their Detection Methods.

Acar S., Soyer Y.
in: Minimally Processed Refrigerated Fruits and Vegetables, F. Yildiz and R.C. WilF. Yildiz and R.C. Wiley, Editor, Springer, London/Berlin , Massachusetts, pp.653-685, 2017

Vulnerabilities, Threats and Gaps in Food Biosecurity

FLETCHER J., ALPAS H. , HENRY C. M. , HAYNES E., DEHNE H. W. , MA L. M. , et al.
in: Practical Tools for Plant and FoodBiosecurity Results from a European Network of Excellence, , Editor, Springer, 2017

Recent Outbreaks of Human Pathogens on Plants (HPOPs)on Fresh Produce – Lessons Learned from the Practice

ALPAS H. , Yeni F., SOYER Y. , FLETCHER J.
in: Practical Tools for Plant and Food BiosecurityResults from a European Network of Excellence, , Editor, Springer, 2017

Antimikrobiyal Koruyucular ve Bakteriyofajlar ile Kontrol

Bulut E., SOYER Y.
in: Temel Gida Mikrobiyolojisi, , Editor, Nobel, pp.489-503, 2016