SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler
Pre-processing of paleogenomes: mitigating reference bias and postmortem damage in ancient genome data
READv2: advanced and user-friendly detection of biological relatedness in archaeogenomics
The Population History of Domestic Sheep Revealed by Paleogenomes.
Benchmarking kinship estimation tools for ancient genomes using pedigree simulations
The first complete genome of the extinct European wild ass (Equus hemionus hydruntinus)
Ancient Sheep Genomes Reveal Four Millennia of North European Short-Tailed Sheep in the Baltic Sea Region
Larsson M. N. A., Morell Miranda P., Pan L., Başak Vural K., Kaptan D., Rodrigues Soares A. E., et al.
Genome Biology and Evolution
, cilt.16, sa.6, 2024 (SCI-Expanded)




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Population Genomic History of the Endangered Anatolian and Cyprian Mouflons in Relation to Worldwide Wild, Feral, and Domestic Sheep Lineages
Genome Biology and Evolution
, cilt.16, sa.5, 2024 (SCI-Expanded)



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Comparison and optimization of protocols and whole-genome capture conditions for ancient DNA samples
The time and place of origin of South Caucasian languages: insights into past human societies, ecosystems and human population genetics
Scientific Reports
, cilt.13, sa.1, 2023 (SCI-Expanded)




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Single hybrid population but multiple parental individuals at the origin of parthenogenetic rock lizards Darevskia sapphirina and D. bendimahiensis Schmidtler, & Eiselt Darevsky (1994) endemic to the area of Lake Van in East Turkey
Effects of coumaphos on locomotor activities of different honeybee (Apis mellifera L.) subspecies and ecotypes
Mobility and kinship in the world's first village societies
Proceedings of the National Academy of Sciences of the United States of America
, cilt.120, sa.4, 2023 (SCI-Expanded)



Spatial and temporal heterogeneity in human mobility patterns in Holocene Southwest Asia and the East Mediterranean.
Current biology : CB
, cilt.33, 2023 (SCI-Expanded)



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CONGA: Copy number variation genotyping in ancient genomes and low-coverage sequencing data
PLoS Computational Biology
, cilt.18, sa.12, 2022 (SCI-Expanded)





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Somatic copy number variant load in neurons of healthy controls and Alzheimer’s disease patients
A genomic snapshot of demographic and cultural dynamism in Upper Mesopotamia during the Neolithic Transition
New insights on commemoration of the dead through mortuary and architectural use of pigments at Neolithic Catalhoyuk, Turkey
SCIENTIFIC REPORTS
, cilt.12, sa.1, 2022 (SCI-Expanded)




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Collaborate equitably in ancient DNA research and beyond
Archaeogenetic analysis of Neolithic sheep from Anatolia suggests a complex demographic history since domestication
Communications Biology
, cilt.4, sa.1, 2021 (SCI-Expanded)



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Human inbreeding has decreased in time through the Holocene
Million-year-old DNA sheds light on the genomic history of mammoths
Van Der Valk T., Pecnerova P., Diez-Del-Molino D., Bergstrom A., Oppenheimer J., Hartmann S., et al.
NATURE
, cilt.591, sa.7849, ss.265-282, 2021 (SCI-Expanded)



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- Patent Family Citations: 2
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Human population dynamics and Yersinia pestis in ancient northeast Asia
SCIENCE ADVANCES
, cilt.7, sa.2, 2021 (SCI-Expanded)



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Variable kinship patterns in Neolithic Anatolia revealed by ancient genomes
Current Biology
, cilt.31, sa.11, 2021 (SCI-Expanded)




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EVOLUTIONARY GENETICS Of dogs and men
Temporal changes in the gene expression heterogeneity during brain development and aging
Social Memory and Mortuary Practices in Neolithic Anatolia
Molecular footprint of Medawar's mutation accumulation process in mammalian aging
AGING CELL
, cilt.18, sa.4, 2019 (SCI-Expanded)



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Ancient Mitochondrial Genomes Reveal the Absence of Maternal Kinship in the Burials of catalhoyuk People and Their Genetic Affinities
GENES
, cilt.10, sa.3, 2019 (SCI-Expanded)




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Genomic and Strontium Isotope Variation Reveal Immigration Patterns in a Viking Age Town
CURRENT BIOLOGY
, cilt.28, sa.17, ss.2730-2748, 2018 (SCI-Expanded)





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Investigating Holocene human population history in North Asia using ancient mitogenomes
Archaeogenetics of Late Iron Age Cemialo Srt, Batman: Investigating maternal genetic continuity in north Mesopotamia since the Neolithic
AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY
, cilt.166, sa.1, ss.196-207, 2018 (SCI-Expanded)



Variation and Functional Impact of Neanderthal Ancestry in Western Asia
GENOME BIOLOGY AND EVOLUTION
, cilt.9, sa.12, ss.3516-3524, 2017 (SCI-Expanded)




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Archaeogenomic analysis of the first steps of Neolithization in Anatolia and the Aegean
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
, cilt.284, sa.1867, 2017 (SCI-Expanded)



The Demographic Development of the First Farmers in Anatolia
CURRENT BIOLOGY
, cilt.26, sa.19, ss.2659-2666, 2016 (SCI-Expanded)



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Disruption of an Evolutionarily Novel Synaptic Expression Pattern in Autism
PLOS BIOLOGY
, cilt.14, sa.9, 2016 (SCI-Expanded)



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- Readers: 168
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Determining the origin of synchronous multifocal bladder cancer by exome sequencing
BMC CANCER
, cilt.15, 2015 (SCI-Expanded)




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Transcriptomic insights into human brain evolution: acceleration, neutrality, heterochrony
CURRENT OPINION IN GENETICS & DEVELOPMENT
, cilt.29, ss.110-119, 2014 (SCI-Expanded)



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Whole genome sequencing of Turkish genomes reveals functional private alleles and impact of genetic interactions with Europe, Asia and Africa
BMC GENOMICS
, cilt.15, 2014 (SCI-Expanded)



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Shared signatures of social stress and aging in peripheral blood mononuclear cell gene expression profiles
Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA
NATURE
, cilt.512, sa.7513, ss.194-210, 2014 (SCI-Expanded)



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Population Genomics Reveal Recent Speciation and Rapid Evolutionary Adaptation in Polar Bears
CELL
, cilt.157, sa.4, ss.785-794, 2014 (SCI-Expanded)





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Classic Selective Sweeps Revealed by Massive Sequencing in Cattle
PLOS GENETICS
, cilt.10, sa.2, 2014 (SCI-Expanded)




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Evolution of Human Longevity Uncoupled from Caloric Restriction Mechanisms
A Scan for Human-Specific Relaxation of Negative Selection Reveals Unexpected Polymorphism in Proteasome Genes
Early gene expression divergence between allopatric populations of the house mouse (Mus musculus domesticus)
Human brain evolution: transcripts, metabolites and their regulators
NATURE REVIEWS NEUROSCIENCE
, cilt.14, sa.2, ss.112-127, 2013 (SCI-Expanded)



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Widespread splicing changes in human brain development and aging
Accelerated aging-related transcriptome changes in the female prefrontal cortex
A Comparison of Brain Gene Expression Levels in Domesticated and Wild Animals
PLOS GENETICS
, cilt.8, sa.9, 2012 (SCI-Expanded)




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Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques
MicroRNA-Driven Developmental Remodeling in the Brain Distinguishes Humans from Other Primates
PLOS BIOLOGY
, cilt.9, sa.12, 2011 (SCI-Expanded)




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Rapid metabolic evolution in human prefrontal cortex
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
, cilt.108, sa.15, ss.6181-6186, 2011 (SCI-Expanded)




MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain
Intergenic and Repeat Transcription in Human, Chimpanzee and Macaque Brains Measured by RNA-Seq
Evolution of Neuronal and Endothelial Transcriptomes in Primates
A Humanized Version of Foxp2 Affects Cortico-Basal Ganglia Circuits in Mice
CELL
, cilt.137, sa.5, ss.961-971, 2009 (SCI-Expanded)




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Transcriptional neoteny in the human brain
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
, cilt.106, sa.14, ss.5743-5748, 2009 (SCI-Expanded)




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Evolution of Primate Gene Expression: Drift and Corrective Sweeps?
Human and Chimpanzee Gene Expression Differences Replicated in Mice Fed Different Diets
Identification and analysis of genomic regions with large between-population differentiation in humans
Metabolic changes in schizophrenia and human brain evolution
GENOME BIOLOGY
, cilt.9, sa.8, 2008 (SCI-Expanded)




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Turks fighting back against anti-evolution forces
Identifying genes underlying skin pigmentation differences among human populations
Gene expression becomes heterogeneous with age
Diğer Dergilerde Yayınlanan Makaleler
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler
Patterns of Neolithization in the Aegean: A synthesis of Material Culture and a-DNA Evidence
World Neolithic Congress, Şanlıurfa, Türkiye, 4 - 08 Kasım 2024
Bringing the understanding of evolution to Turkish public: A volunteer organization model for developing countries
69th Annual Meeting of the Society-for-Developmental-Biology/Japanese-Society-of-Developmental-Biologists, New-Mexico, Amerika Birleşik Devletleri, 5 - 09 Ağustos 2010, cilt.344, ss.439

Kitaplar
A genomic history of Neolithization in Anatolia: Preliminary insights
People of Anatolia: Past, Current and Future Research in the Biological Anthropology of Türkiye, Irvine Benjamin, Vandeput Lutgarde, ERDAL YILMAZ SELİM, Editör, British Institute at Ankara, Londrina, ss.63-72, 2024
Intramural burials in Neolithic Anatolia: What do they tell us about social organisation?
Kinship, Sex, and Biological Relatedness : The contribution of archaeogenetics to the understanding of social and biological relations. 15. Mitteldeutscher Archäologentag vom 6. bis 8. Oktober 2022 in Halle (Saale), Heidelberg: Propylaeum, 2023 (Tagungen des Landesmuseums für Vorgeschichte Halle, Band 26), Meller, H.; Krause, J.; Haak, W.; Risch, R., Editör, Propylaeum, Halle (Saale), ss.137-147, 2023
From Bones to Genomes: Current Research on the Population History of Prehistoric Anatolia
The Archaeology of Anatolia, Volume IV: Recent Discoveries (2018–2020), Steadman Sharon R.,McMahon Gregory, Editör, Cambridge Scholars Publishing, Cambridge, ss.355-371, 2021