Yayınlar & Eserler

SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

JOA: Joint Overlap Analysis of multiple genomic interval sets

BMC BIOINFORMATICS, cilt.20, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

SUMONA: A supervised method for optimizing network alignment

COMPUTATIONAL BIOLOGY AND CHEMISTRY, cilt.63, ss.41-51, 2016 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Alternative Polyadenylation: Another Foe in Cancer

MOLECULAR CANCER RESEARCH, cilt.14, ss.507-517, 2016 (SCI İndekslerine Giren Dergi) Creative Commons License identifier identifier identifier

3 ' UTR shortening and EGF signaling: implications for breast cancer

HUMAN MOLECULAR GENETICS, cilt.24, ss.6910-6920, 2015 (SCI İndekslerine Giren Dergi) Creative Commons License identifier identifier identifier

The CHEMDNER corpus of chemicals and drugs and its annotation principles

JOURNAL OF CHEMINFORMATICS, cilt.7, 2015 (SCI İndekslerine Giren Dergi) identifier identifier

A Divide and Conquer Approach for Construction of Large-Scale Signaling Networks from PPI and RNAi Data Using Linear Programming

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, cilt.10, ss.869-883, 2013 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Estrogen-induced upregulation and 3 '-UTR shortening of CDC6

NUCLEIC ACIDS RESEARCH, cilt.40, ss.10679-10688, 2012 (SCI İndekslerine Giren Dergi) Creative Commons License identifier identifier identifier

Large-Scale Signaling Network Reconstruction

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, cilt.9, ss.1696-1708, 2012 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Using network context as a filter for miRNA target prediction

BIOSYSTEMS, cilt.105, ss.201-209, 2011 (SCI İndekslerine Giren Dergi) identifier identifier identifier

METADATA MANAGEMENT AND SEMANTICS IN MICROARRAY REPOSITORIES

BALKAN JOURNAL OF MEDICAL GENETICS, cilt.14, ss.49-63, 2011 (SCI İndekslerine Giren Dergi) Creative Commons License identifier identifier

Bi-k-bi clustering: mining large scale gene expression data using two-level biclustering

INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, cilt.4, ss.701-721, 2010 (SCI İndekslerine Giren Dergi) Creative Commons License identifier identifier

Efficient molecular surface generation using level-set methods

JOURNAL OF MOLECULAR GRAPHICS & MODELLING, cilt.25, ss.442-454, 2006 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

Transcription Elongation in Connection to 3’UTR Ends

Moleküler Biyoloji Kongresi MolBiyoKON18, İzmir, Türkiye, 5 - 08 Eylül 2018, ss.20

Deregulated APA and cancer specific APA isoforms

Annual Meeting of the American-Association-for-Cancer-Research (AACR), Illinois, Amerika Birleşik Devletleri, 14 - 18 Nisan 2018, cilt.78 identifier

APA isoform diversity in triple negative breast cancers

AACR Annual Meeting, USA, Washington, Amerika Birleşik Devletleri, 1 - 05 Nisan 2017, cilt.77, ss.3374 identifier

3 ' UTR lengths change in connection with estrogen receptor-alpha in breast cancer

41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Türkiye, 3 - 08 Eylül 2016, cilt.283, ss.207 identifier

Unsupervised identification of redundant domain entries in InterPro database using clustering techniques

6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2015, Georgia, Amerika Birleşik Devletleri, 9 - 12 Eylül 2015, ss.505-506 identifier

Dbchem A database query based solution for the chemical compound and drug name recognition task

Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, BioCreative IV,, 1 - 03 Ekim 2013, cilt.2, ss.42-46

CONSTRUCTING SIGNALING PATHWAYS FROM RNAI DATA USING GENETIC ALGORITHMS

6th International Symposium on Health Informatics and Bioinformatics (HIBIT), İzmir, Türkiye, 2 - 05 Mayıs 2011, ss.95-98 identifier

Parallel SPICi

6th International Symposium on Health Informatics and Bioinformatics (HIBIT), İzmir, Türkiye, 2 - 05 Mayıs 2011, ss.86-90 identifier

The effect of representative training dataset selection on the classification performance of the promoter sequences

6th International Symposium on Health Informatics and Bioinformatics, HIBIT 2011, İzmir, Türkiye, 2 - 05 Mayıs 2011, ss.55-58 identifier identifier

Text Classification in the Turkish Marketing Domain for Context Sensitive Ad Distribution

24th International Symposium on Computer and Information Sciences, Güzelyurt, Kıbrıs (Kktc), 14 - 16 Eylül 2009, ss.105-110 identifier identifier

Human Skeletal and Muscle Deformation Animation Using Motion Capture Data

16th International Conference in Central Europe on Computer Graphics, Visualization and Computer Vision, Plzen, Çek Cumhuriyeti, 4 - 07 Şubat 2008, ss.167-168 identifier

Analysis of protein-protein interaction networks using random walks

5th International Workshop on Bioinformatics, BIOKDD 2005 - In Conjunction with 11th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD 2005, Chicago, IL, Amerika Birleşik Devletleri, 21 Ağustos 2005, ss.61-68 identifier

CTSS: A robust and efficient method for protein structure alignment based on local geometrical and biological features

2nd International Computational Systems Bioinformatics Conference, California, Amerika Birleşik Devletleri, 11 - 14 Ağustos 2003, ss.169-179 identifier identifier

Kitap & Kitap Bölümleri

Introduction to Bioinformatics

miRNomics MicroRNA Biology and Computational Analysis, Yousef Malik, Allmer Jens, Editör, Springer Protocols, ss.51-71, 2013