Publications & Works

Published journal articles indexed by SCI, SSCI, and AHCI
Articles Published in Other Journals
Refereed Congress / Symposium Publications in Proceedings

Transcription Elongation in Connection to 3’UTR Ends

Moleküler Biyoloji Kongresi MolBiyoKON18, İzmir, Turkey, 5 - 08 September 2018, pp.20

Deregulated APA and cancer specific APA isoforms

Annual Meeting of the American-Association-for-Cancer-Research (AACR), Illinois, United States Of America, 14 - 18 April 2018, vol.78 Sustainable Development identifier

APA isoform diversity in triple negative breast cancers

AACR Annual Meeting, USA, Washington, United States Of America, 1 - 05 April 2017, vol.77, pp.3374 Sustainable Development identifier

Comparison of tissue disease specific integrated networks using directed graphlet signatures

Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics - BCB '16, Seattle, WA, USA, United States Of America, 2 - 05 October 2016

3 ' UTR lengths change in connection with estrogen receptor-alpha in breast cancer

41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Turkey, 3 - 08 September 2016, vol.283, pp.207 Sustainable Development identifier

Unsupervised identification of redundant domain entries in InterPro database using clustering techniques

6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2015, Georgia, United States Of America, 9 - 12 September 2015, pp.505-506 identifier

Reconstruction of the Temporal Signaling Network in Salmonella Infected Human Cells

23rd Annual International Conference on Intelligent Systems for Molecular Biology and the 14th European Conference on Computational Biology (ISMBECCB’2015), Dublin, Ireland, 10 - 14 July 2015

Dbchem A database query based solution for the chemical compound and drug name recognition task

Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, BioCreative IV,, 1 - 03 October 2013, vol.2, pp.42-46

M4B: A novel method for designing and ordering of the genetic devices

2012 7th International Symposium on Health Informatics and Bioinformatics, HIBIT 2012, Cappadocia, Turkey, 19 - 22 April 2012, pp.123-127 identifier

Parallel SPICi

6th International Symposium on Health Informatics and Bioinformatics (HIBIT), İzmir, Turkey, 2 - 05 May 2011, pp.86-90 identifier

CONSTRUCTING SIGNALING PATHWAYS FROM RNAI DATA USING GENETIC ALGORITHMS

6th International Symposium on Health Informatics and Bioinformatics (HIBIT), İzmir, Turkey, 2 - 05 May 2011, pp.95-98 identifier

The effect of representative training dataset selection on the classification performance of the promoter sequences

6th International Symposium on Health Informatics and Bioinformatics, HIBIT 2011, İzmir, Turkey, 2 - 05 May 2011, pp.55-58 identifier identifier

Coevolution based prediction of protein-protein interactions with reduced training data

2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Turkey, 20 - 22 April 2010, pp.187-193 Creative Commons License identifier

Text Classification in the Turkish Marketing Domain for Context Sensitive Ad Distribution

24th International Symposium on Computer and Information Sciences, Güzelyurt, Cyprus (Kktc), 14 - 16 September 2009, pp.105-110 identifier identifier

Human Skeletal and Muscle Deformation Animation Using Motion Capture Data

16th International Conference in Central Europe on Computer Graphics, Visualization and Computer Vision, Plzen, Czech Republic, 4 - 07 February 2008, pp.167-168 identifier

Analysis of protein-protein interaction networks using random walks

5th International Workshop on Bioinformatics, BIOKDD 2005 - In Conjunction with 11th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD 2005, Chicago, IL, United States Of America, 21 August 2005, pp.61-68 identifier

CTSS: A robust and efficient method for protein structure alignment based on local geometrical and biological features

2nd International Computational Systems Bioinformatics Conference, California, United States Of America, 11 - 14 August 2003, pp.169-179 identifier identifier
Books & Book Chapters

Introduction to Bioinformatics

in: miRNomics MicroRNA Biology and Computational Analysis, Yousef Malik, Allmer Jens, Editor, Springer Protocols, pp.51-71, 2013
Metrics

Publication

53

Citation (WoS)

654

H-Index (WoS)

12

Citation (Scopus)

694

H-Index (Scopus)

14

H-Index (Scholar)

6

Project

14

Intellectual Property

1

Thesis Advisory

36

Open Access

47
UN Sustainable Development Goals