Publications & Works

Journal articles indexed in SCI, SSCI, and AHCI 42
Papers Presented at Peer-Reviewed Scientific Conferences 63

Dynamic comparative secretome analysis of Bacillus subtilis standard strain and its bacilysin-deleted mutant.

19th International Conference on Bacilli and Gram-Positive Bacteria, Berlin, Germany, 11 - 15 June 2017, pp.94

Biological network modeling based on differentially expressed proteins in a bacilysin-deficient strain of Bacillus subtilis

20th International Conference on Bacilli and Gram-Positive Bacteria, Washington, United States Of America, 23 - 26 July 2019, pp.11, (Summary Text)

Whole genome sequence analysis of lab-adapted Bacillus subtilis strains implies strain evolution in 40 years

14th Congress of Microbiologists in Bulgaria with International Participation, Haskovo, Bulgaria, 10 - 13 October 2018, pp.10

Streptomyces clavuligerus’ta lysaA ve ccarR genlerinin sefamisin C biyosentezi üzerindeki etkileri

19. Uluslararası Katılımlı Ulusal Biyoteknoloji Kongresi , Eskişehir, Turkey, 1 - 03 December 2017, pp.61

Bacillus subtilis ΔbacA mutantının karşılaştırmalı dinamik sekretom analizi

2. Ulusal Proteomik Kongresi , İstanbul, Turkey, 24 - 25 November 2017, pp.16, (Summary Text)

Antibiyotik rezistom analizlerinde proteomik ve metaproteomik teknolojiler

2. Ulusal Proteomik Kongresi , İstanbul, Turkey, 24 - 25 November 2017, pp.28

Bacilysin is a small, fine-tuning effector of mother cell compartment-specific σE and σK regulons in Bacillus subtilis

19th International Conference on Bacilli and Gram-Positive Bacteria , Berlin, Germany, 11 - 15 June 2017, pp.12

Assessment of immune protective capacity of the recombinant Iron Superoxide Dismutase (FeSOD) from Bordetella pertussis

FEMS 2015-6th Congress of European Microbiologists , Maastricht, Netherlands, 7 - 11 June 2015, pp.181

Sistem Biyolojisi ve Rezistom Analizi: Çevresel Meta Örneklerden Kliniğe

37. Türk Mikrobiyoloji Kongresi , Antalya, Turkey, 16 - 20 November 2016, pp.116-122

Differential proteomics of wild type and engineered strains of S. clavuligerus

17th International Symposium on the Biology of Actinomycetes (ISBA17), Aydın, Turkey, 8 - 12 October 2014, pp.109

An overview of Streptomyces proteomics

17th International Symposium on the Biology of Actinomycetes, Aydın, Turkey, 8 - 12 October 2014, pp.37

Proteome-wide analysis of the functional roles of bacilysin biosynthesis in Bacillus subtilis

16th European Congress on Biotechnology , Edinburgh, United Kingdom, 13 - 16 July 2014, vol.31, pp.68

Lessons from Bordetella pertussis proteomics

FEMS 2013-5th Congress of European Microbiologists, Leipzig, Germany, 21 - 25 July 2013, pp.52

Jele dayalı ve jelden bağımsız yaklaşımlarla Bordetella pertussis proteomu ve alt proteomları

PROTEOMİSTANBUL 2013 [Uluslararası Katılımlı Proteomik Kursu ve Çalıştayı, İstanbul, Turkey, 15 - 17 July 2013, pp.1

Boğmaca etkeni Bordetella pertussis’in tamamlanmış tüm hücresel proteomu

9. Ankara Biyoteknoloji Günleri, Ankara, Turkey, 17 - 18 October 2011, pp.102-107

Monitoring the regulatory effect of ccaR gene on the cephamycin C cluster in Streptomyces clavuligerus

4th Congress of European Microbiologists FEMS 2011 , Geneve, Switzerland, 26 - 30 June 2011, pp.54, (Summary Text)

Analysis of cross immune reactions between standard and local strains of Bordetella pertussis in Turkey

36th FEBS Congress of the Biochemistry for Tomorrows Medicine, Torino, Italy, 25 - 30 June 2011, vol.278, pp.297 identifier

Development of new vaccine strategies against Pasteurella multocida

Prato Conference on the Pathogenesis of Bacterial Diseases of Animals , Prato, Italy, 6 - 09 October 2010, pp.47 Sustainable Development

Serratia marcescens'e ait kitinaz A geninin tütün bitkisine aktarılması.

XVI. Ulusal Biyoteknoloji Kongresi , Antalya, Turkey, 13 - 16 December 2009, pp.14-15

Bordetella pertussis Tohama I ve Saadet suşuna ait PPIase, POMP ve FIMX genlerinin klonlanması

XVI. Ulusal Biyoteknoloji Kongresi , Antalya, Turkey, 13 - 16 December 2009, pp.71-72

Pasteurella multocida P-1062 suşuna ait ompH geninin klonlanması ve biyoinformatik analizi.

XVI. Ulusal Biyoteknoloji Kongresi , Antalya, Turkey, 13 - 16 December 2009, pp.15

Proteome-wide analysis of functional roles of bacilysin biosynthesis in Bacillus subtilis.

International Symposium on Biotechnology: Developments and Trends, Ankara, Turkey, 27 - 30 September 2009, pp.98

Transcriptional analysis of the effect of ccaR regulatory gene on cephamycin C biosynthesis by Streptomyces clavuligerus

International Symposium on Biotechnology: Developments and Trends , Ankara, Turkey, 27 - 30 September 2009, pp.74

Cross immune reactions between strains of Bordetella pertussis: Standard Tahoma I versus local isolates.

International Symposium on Biotechnology: Developments and Trends, Ankara, Turkey, 27 - 30 September 2009, pp.72

Metabolic engineering of aspartate pathway for increased production of cephamycin C in Streptomyces clavuligerus

International Symposium on Biotechnology: Developments and Trends, Ankara, Turkey, 27 - 30 September 2009, pp.99

Cytoplasmic and outer membrane proteome of B. parapertussis 12822 and immunological analysis of its cytoplasmic proteins

International Symposium on Biotechnology: Developments and Trends , Ankara, Turkey, 27 - 30 September 2009, pp.95

Integration of a regulatory gene into the chromosome of an industrial Streptomyces clavuligerus strain for enhanced clavulanic acid biosynthesis

International Symposium on Biotechnology: Developments and Trends , Ankara, Turkey, 27 - 30 September 2009, pp.73

Outer membrane proteome of Bordetella pertussis Tohama

3rd FEMS Congress of European Microbiologists, Gothenburg, Sweden, 28 June - 02 July 2009, pp.30, (Summary Text)

Immunoproteomic analysis of the secretome of Bordetella pertussis.

3rd FEMS Congress of European Microbiologists, Gothenburg, Sweden, 28 June - 02 July 2009, pp.27, (Summary Text)

The regulation effects of codY and abrB on the expression of yvfI in Bacillus subtilis

IUMS-XII. International Congress of Bacteriology and Applied Microbiology , İstanbul, Turkey, 5 - 09 August 2008, pp.64

The effects of Phr peptides on the expression of bacABCDE operon in B. subtilis

IUMS-XII. International Congress of Bacteriology and Applied Microbiology , İstanbul, Turkey, 5 - 09 August 2008, pp.113

Cephamycin C overproduction upon releasing relaxing precursor flux by genetic engineering and medium formulation.

IUMS-XII. International Congress of Bacteriology and Applied Microbiology, İstanbul, Turkey, 5 - 09 August 2008, pp.98, (Summary Text)

Proteomics of Stress Response in Microbes: A Brief Overview

IUMS-XII. International Congress of Bacteriology and Applied Microbiology , İstanbul, Turkey, 5 - 09 August 2008, pp.36

Homologous expression of cry3Aa11 in Bacillus thuringiensis Mm2 increases the production of Coleoptera-specific delta-endotoxin

IUMS-XII. International Congress of Bacteriology and Applied Microbiology , İstanbul, Turkey, 5 - 09 August 2008, pp.77

Low-cost medium development for production of Bacillus thuringiensis-based biopesticides

IUMS-XII. International Congress of Bacteriology and Applied Microbiology , İstanbul, Turkey, 5 - 09 August 2008, pp.88

Characterization and homologous expression of endochitinase gene (chi3023) from Bacillus thuringiensis serovar. morrisoni.

IUMS-XII. International Congress of Bacteriology and Applied Microbiology , İstanbul, Turkey, 5 - 09 August 2008, pp.75

The effects of spo0A-abrB regulation system on the expression of yvfI gene in B. subtilis

IUMS-XII. International Congress of Bacteriology and Applied Microbiology, İstanbul, Turkey, 5 - 09 August 2008, pp.61

Phanerochaete chrysosporium'un İlk Proteom Haritası ve Ağır Metal Yanıtının Proteom Analizi

XV. Ulusal Biyoteknoloji Kongresi, Antalya, Turkey, 28 - 31 October 2007, pp.257-261

cry3Aa11 Geninin Çoklu Kopyasının Bacillus thuringiensis Mm2'nin Toksin Üretimi Üzerine Etkisi

XV. Ulusal Biyoteknoloji Kongresi , Antalya, Turkey, 28 - 31 October 2007, pp.313-316

Bacillus thuringiensis alttür morrisoni Kitinaz Geninin Karakterizasyonu

XV. Ulusal Biyoteknoloji Kongresi , Antalya, Turkey, 28 - 31 October 2007, pp.303-306

spo0A, spo0H, comA, comP ve comQ Gen Ürünlerinin Bacillus subtilis bacABCDE Operonunun Ekspresyonu Üzerine Etkileri.

XV. Ulusal Biyoteknoloji Kongresi , Antalya, Turkey, 28 - 31 October 2007, pp.47-48, (Summary Text)

Bordetella pertussis immunoproteome

International Conference of Immunogenomics and Immunomics , Budapest, Hungary, 8 - 12 October 2006, pp.320

Aspartate pathway engineering for improving cephamycin C yields in S. clavuligerus

2nd FEMS Congress of European Microbiologists, Madrid, Spain, 4 - 08 July 2006, pp.128

Effect of homologous multiple copies of ask gene on cephamycin C biosynthesis in Streptomyces clavuligerus

31st Congress of the Federation-of-European-Biochemical-Societies (FEBS), İstanbul, Turkey, 24 - 29 June 2006, vol.273, pp.325-326 identifier

Disruption of hom gene of Streptomyces clavuligerus and its effects on cephamycin C yields

31st Congress of the Federation-of-European-Biochemical-Societies (FEBS), İstanbul, Turkey, 24 - 29 June 2006, vol.273, pp.325, (Summary Text) identifier

Effect of bacterial treatment on silver recovery from Artvin-Kafkasor ore

8th International Mineral Processing Symposium (IMPS-2000), Antalya, Turkey, 16 - 18 October 2000, pp.553-556 identifier

Enhanced recovery of silver from Artvin-Kafkasor ore by microbial treatment

13th International Symposium on Biohydrometallurgy (IBS 99), Madrid, Spain, 20 - 23 June 1999, vol.9, pp.493-499 identifier

Heavy metal biosorption by white-rot fungi

Proceedings of the 1998 19th Biennial Conference of the International Association on Water Quality. Part 1 (of 9), Vancouver, Canada, 21 - 26 June 1998, vol.38, pp.323-330, (Full Text) Creative Commons License identifier identifier

Heavy Metal Biosorption by Polyporous Versicolor

MESAEP, 9th International Symposium on Environmental Pollution and its Impact on Life in the Mediterranean Region, Italy, 4 - 09 October 1997

SUBCELLULAR-DISTRIBUTION OF ACCUMULATED HEAVY-METALS IN SACCHAROMYCES-CEREVISIAE AND KLUYVEROMYCES-MARXIANUS

2nd Conference on Advances in Biochemical Engineering (ABE 2), Brighton, United Kingdom, 4 - 06 July 1994, pp.151-153 identifier

Subcellular distribution of accumulated heavy metals in S. cerevisiae and K. marxianus

Proceedings of the 2nd Conference on Advances in Biochemical Engineering, Brighton, England, 4 - 06 July 1994, pp.151-153 identifier
Books 2

Sıvı kromatografi-Kütle spektrometrisi (LC-MS). Proteomiği

in: Temel ve İleri Moleküler Biyoloji Yöntemleri: Genomik ve Proteomik Analizler., Güler Temizkan and Nazlı Arda, Editor, Nobel Tıp Kitapevleri Tic. Ltd.., İstanbul, pp.687-700, 2018

Advances in beta-lactam antibiotics

in: Antimicrobial compounds. Current Strategies and New Alternatives., T.G.Villa,P. Veiga-Crespo, Editor, Springer-Verlag , Berlin, pp.115-147, 2013 Creative Commons License Sustainable Development
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