Assoc. Prof. YEŞİM AYDIN SON

Academic Titles

2024 - Continues Associate Professor

Middle East Technical University, Presidency Office, NÖROM
2017 - Continues Associate Professor

Middle East Technical University, Graduate School of Informatics, Medical Informatics
2010 - 2017 Assistant Professor

Middle East Technical University, Graduate School of Informatics, Medical Informatics
2009 - 2010 Lecturer PhD

Middle East Technical University, Graduate School of Informatics, Medical Informatics

Managerial Experience

2023 - Continues Applied Research Center Board Member

Middle East Technical University, Presidency Office, NÖROM
2012 - Continues Head of Department

Middle East Technical University, Graduate School of Informatics, Medical Informatics
2010 - 2012 Institute Board Member

Middle East Technical University, Graduate School of Informatics, Medical Informatics
2010 - 2012 Program Coordinator

Middle East Technical University, Graduate School of Informatics, Medical Informatics

Non Academic Experience

2007 - 2009 Post-Doctoral Research Fellow

City of Hope National Medical Center, Duarte,CA
2000 - 2006 Assistant

University of Tennessee, Knoxville
1998 - 1999 Intern Dr.

Hacettepe University Faculty of Medicine

Courses

Postgraduate Introduction to Medical Informatics
Postgraduate Next Generation Sequence Analysis
Doctorate MICROARRAY DATA ANALYSIS AND INFORMATICS
Postgraduate CLINICAL BIOINFORMATICS
Postgraduate PROTEIN AND DNA SEQUENCE ANALYSIS
Postgraduate Futures Studies in Healthcare

Advising Theses

BORIC ACID INDUCED TRANSCRIPTOMIC CHANGES IN HEPG2 CELL LINE AT GROWTH INHIBITORY CONCENTRATIONS

Aydin Son Y. (Advisor)

A.TOMBULOĞLU(Student), Doctorate, 2023
A COMPREHENSIVE ANALYSIS OF MUTATIONS IN CANCERS AND NEURODEVELOPMENTAL DISORDERS

Aydin Son Y., Tunçbağ N. (Co-Advisor)

B.RUKEN(Student), Doctorate, 2023
Comparative analysis of brain cell cultures and tissues in alzheimer's disease based on differential expression and gene set enrichment

Aydin Son Y. (Advisor)

H.CAHİT(Student), Postgraduate, 2023
Quantification of bradykinesia in parkinson's disease by using facial images and emg recordings

Aydin Son Y., Gökçay D. (Co-Advisor)

S.CAN(Student), Doctorate, 2023
Integrative predictive modeling of metastasis in melanoma cancer

Aydın Son Y. (Advisor)

A.KUTLAY(Student), Doctorate, 2022
Utility of resequencing and reanalysis for unsolved rare diseases

Aydin Son Y., Ezgü F. S.(Co-Advisor)

Ö.FARUK(Student), Postgraduate, 2022
Fluorescent labeling of SPOCK1 and localization studies in live neural cell lines

Aydin Son Y. (Co-Advisor), Son Ç. D.

Z.EDA(Student), Postgraduate, 2022
MFDM: MRI free decision model for diagnosis and treatment selection in patients with low back and neck pain

Aydin Son Y. (Advisor)

B.MİMAROĞLU(Student), Doctorate, 2022
Comparison of Entropy and Ensemble-based feature selection through network analysis of Alzheimers disease-associated variants

Aydın Son Y. (Advisor)

S.RAFATOV(Student), Postgraduate, 2022
Artificial learning-based analysis of molecular, clinical trials and patent data for improved drug development

Aydin Son Y., Doğan T.(Co-Advisor)

F.ÇIRAY(Student), Doctorate, 2022
Implementation of krona into QIIME 2

Aydin Son Y. (Advisor)

K.BÜYÜKALTAY(Student), Postgraduate, 2022
Implementation of A patient empowerment platform for ıntegrated care

Aydin Son Y., Laleci Ertürkmen G. B. (Co-Advisor)

B.SARIGÜL(Student), Postgraduate, 2022
Predicting multiple types of biological relationships with integrative non-negative matrix factorization

Aydin Son Y. (Advisor)

O.SAVAŞ(Student), Postgraduate, 2022
Integration of machine learning and entropy methods for post-genome-wide association studies analysis

Aydın Son Y. (Advisor)

B.YALDIZ(Student), Doctorate, 2022
Identification of cellular stress related biomolecules for eventual use in targeted therapies of hepatocellular carcinoma

AYDIN SON Y. (Advisor)

D.GÖZEN(Student), Doctorate, 2021
Systems biology analysis of kinase inhibitors in liver cancer cells using next generation sequencing data

AYDIN SON Y. (Advisor)

K.NARCI(Student), Doctorate, 2021
GENOME-WIDE SEQUENCE ANALYSIS OF HUMAN SPLICE ACCEPTOR REGIONS FOR MOTIF DISCOVERY

Aydin Son Y. (Advisor)

G.KARADUMAN(Student), Doctorate, 2020
Identification and investigation of metastasis specific miRNAs in breast cancer cells for miRNA replacement therapy

Ergene E., Aydin Son Y. (Co-Advisor)

E.EKENEL(Student), Doctorate, 2019
Optimization of weights and features in use of ahp for SNP prioritization

AYDIN SON Y. (Advisor)

A.YILMAZ(Student), Doctorate, 2018
Essential design components of genetic data enabled mobile personal health record systems

AYDIN SON Y. (Advisor), AYDINOĞLU A. U. (Co-Advisor)

Ö.ÖZKAN(Student), Doctorate, 2018
Genomic modelling of bipolar disorders: Comparison of multifactor dimension reduction and classification-based data mining methods

AYDIN SON Y. (Advisor)

C.AÇIKEL(Student), Doctorate, 2017
Investigation of the in vitro cytotoxic effects of boron on human hepatocellular carcinoma cell line, HepG2

GÜRAY N. T. (Co-Advisor), AYDIN SON Y. (Co-Advisor)

H.ÇÖPOĞLU(Student), Postgraduate, 2017
Investigating the role of RNA-binding proteins (RBPs) in explaining differential gene expression in cancer

AYDIN SON Y. (Advisor)

A.LAFZI(Student), Postgraduate, 2016
Reconstruction of the temporal signaling network in salmonella infected human cells

AYDIN SON Y. (Co-Advisor), TUNÇBAĞ N. (Co-Advisor)

G.BUDAK(Student), Postgraduate, 2016
A multi-layered graphical model of the relation among SNPs, genes, and pathways based on subgraph search

CAN T. (Co-Advisor), AYDIN SON Y. (Co-Advisor)

G.ERSOY(Student), Postgraduate, 2015
Modeling the combined effect of RNA-binding proteins and micrornas in post-transcriptional regulation

AYDIN SON Y. (Advisor)

S.HAFEZQORANI(Student), Postgraduate, 2015
Integration of metu-snp databases via rdf for pi-snp web service

AYDIN SON Y. (Advisor)

C.GEDİKOĞLU(Student), Postgraduate, 2014
Single nucletide polymorphism (SNP) data integrated electronic health record (EHR) for personalized medicine

AYDIN SON Y. (Advisor)

T.Beyan(Student), Doctorate, 2014
Cytokine polymorphism catalog (CytoCAT) for the analysis of phenotype associations

AYDIN SON Y. (Co-Advisor), ACAR A. C. (Co-Advisor)

G.OĞUZ(Student), Postgraduate, 2014
Integration of METU-SNP databases via RDF for PI_SNP web service

AYDIN SON Y. (Co-Advisor), Son Y.(Co-Advisor)

C.Gedikoğlu(Student), Postgraduate, 2014
Investigation of structural properties of methylated human promoter regions in terms of DNA helical rise

AYDIN SON Y. (Advisor)

B.YALDIZ(Student), Postgraduate, 2014
Single nucleotide polymorphism (SNP) data integrated electronic health record (EHR) for personalized medicine

AYDIN SON Y. (Advisor)

T.BEYAN(Student), Doctorate, 2014
A predictive model for type 2 diabetes mellitus based on genomic and phenotypic risk factors

AYDIN SON Y. (Advisor)

H.GÜL(Student), Doctorate, 2014
Investigation of schizophrenia related genes and pathways through genome wide association studies

AYDIN SON Y. (Advisor)

H.ALPER(Student), Postgraduate, 2013
A hybrid feature selection model for genome wide association studies

AYDIN SON Y. (Co-Advisor), BAYKAL N. (Co-Advisor)

S.CAN(Student), Doctorate, 2013
A Method to improve the communication between information technology and healthcare professionals during mobile healthcare application development

AYDIN SON Y. (Co-Advisor), Son Y.(Co-Advisor)

Y.Nasuh(Student), Postgraduate, 2013
A framework for gene co-expression network analysis of lung cancer

CAN T. (Co-Advisor), AYDIN SON Y. (Co-Advisor)

E.AKDEMİR(Student), Postgraduate, 2013
Investigation of human promoter CpG content and methylation profiles at different conservation levels

AYDIN SON Y. (Advisor)

B.DEMİRALAY(Student), Postgraduate, 2012
Predicting the disease of alzheimer (AD) with SNP biomarkers and clinical data based decision support system using data mining classification approaches

AYDIN SON Y. (Advisor)

O.ERDOĞAN(Student), Postgraduate, 2012
An integrative approach to structured SNP prioritization and representative snp selection for genome-wide association studies

AYDIN SON Y. (Advisor)

G.ÜSTÜNKAR(Student), Doctorate, 2011
Determination of performance parameters for AHP based single nucleotide polymorphism (SNP) prioritization approach on Alzheimer’s disease data

AYDIN SON Y. (Advisor)

O.Kadıoğlu(Student), Postgraduate, 2011
Determination of performance parameters for AHP based single nucleotide polymorphism (SNP) prioritization approach on alzheimers's disease data

AYDIN SON Y. (Advisor)

O.KADIOĞLU(Student), Postgraduate, 2011

Academic and Administrative Experience

Academic Titles

2024 - Continues Associate Professor

2017 - Continues Associate Professor

2010 - 2017 Assistant Professor

2009 - 2010 Lecturer PhD

Managerial Experience

2023 - Continues Applied Research Center Board Member

2012 - Continues Head of Department

2010 - 2012 Institute Board Member

2010 - 2012 Program Coordinator

Non Academic Experience

2007 - 2009 Post-Doctoral Research Fellow

2000 - 2006 Assistant

1998 - 1999 Intern Dr.

Courses

Postgraduate Introduction to Medical Informatics

Postgraduate Next Generation Sequence Analysis

Doctorate MICROARRAY DATA ANALYSIS AND INFORMATICS

Postgraduate CLINICAL BIOINFORMATICS

Postgraduate PROTEIN AND DNA SEQUENCE ANALYSIS

Postgraduate Futures Studies in Healthcare

Advising Theses