Publications & Works

Articles Published in Journals That Entered SCI, SSCI and AHCI Indexes

Molecular cloning and co-expression of Thermoplasma volcanium proteasome subunit genes

PROTEIN EXPRESSION AND PURIFICATION, vol.73, pp.223-230, 2010 (Journal Indexed in SCI) identifier identifier identifier

Induced CYP1A mRNA, protein and catalytic activity in the liver of feral fish, leaping mullet, Liza saliens

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY, vol.128, no.2, pp.281-290, 2001 (Journal Indexed in SCI) Sustainable Development identifier identifier identifier

Amino acid substitutions in the subunit interface enhancing thermostability of Thermoplasma acidophilum citrate synthase

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, vol.249, pp.566-571, 1998 (Journal Indexed in SCI) identifier identifier identifier

ANALYSIS OF PLASMIDS MEDIATING ANT (2'') AND AAC(3)-II BASED GENTAMICIN RESISTANCE IN CLINICAL ISOLATES OF ENTEROBACTERIACEAE

ZENTRALBLATT FUR BAKTERIOLOGIE-INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY VIROLOGY PARASITOLOGY AND INFECTIOUS DISEASES, vol.271, no.2, pp.214-221, 1989 (Journal Indexed in SCI) identifier identifier identifier

A THERMO-STABLE DEHALOGENASE IN THE EXTRACTS FROM PSEUDOMONAS SP (STRAIN-19S)

BIOTECHNOLOGY LETTERS, vol.11, pp.397-400, 1989 (Journal Indexed in SCI) identifier identifier

Articles Published in Other Journals

Effects of Metals on Elastase from Pseudomonas aeruginosa SES-938-1

Biological Trace Element Research, vol.50, no.1, pp.25-31, 1995 (Refereed Journals of Other Institutions)

Cloning and Expression of a Haloacid Dehalogenase form Pseudomonas sp. Strain 19S,

Biodegradation, vol.6, no.3, pp.217-222, 1995 (Refereed Journals of Other Institutions)

A Modified Method for RNA Isolation from Bacteria by Guanidinium Thiocyanate - Cesium Chloride Centrifugation,”

BioTechniques, vol.18, no.4, pp.570-572, 1995 (Refereed Journals of Other Institutions)

Amino Acid Substitutions within the Analogous Nucleotide Binding Loop (P-Loop) of Aminoglycoside 3' -Phosphotransferase-II

International Journal of Biochemistry, vol.26, no.1, pp.61-66, 1994 (Refereed Journals of Other Institutions)

Evaluation of Plasmid DNA and Protein Profiles as Epidemiological Tools in Pseudomonas aeruginosa

Chemotherapy Int. J. Experiment. Clin. Chemother , vol.5, no.1, pp.37-40, 1992 (Refereed Journals of Other Institutions)

,” Structure - Function Analyses for Aminoglycoside 3'-Phosphotransferase-II [APH(3')-II]

SAAS Bulletin: Biochem. Biotech, vol.5, pp.158-163, 1992 (Refereed Journals of Other Institutions)

Aminoglycoside Resistance Profiles of the Gentamicin Resistant Enterobacteriaceae and Pseudomonas Strains

Int. J. Experiment. Clin. Chemother, vol.2, no.2, pp.118-124, 1989 (Refereed Journals of Other Institutions)

Plasmid Profiles of Gentamicin Resistant Gram Negative Bacilli

HACETTEPE MEDICAL JOURNAL, vol.22, no.2, pp.79-86, 1989 (Refereed Journals of Other Institutions)

Biodegradation of Halogenated Hydrocarbons

JOURNAL OF KÜKEM, vol.12, no.1, pp.15-28, 1989 (Other Refereed National Journals)

Resistance to Aminoglycoside Antibiotics

JOURNAL OF ANKEM, vol.2, no.3, pp.203-206, 1988 (Other Refereed National Journals)

Determination of Aminoglycoside Modification Enzymes by MIC Ratio Method and its Comparison with Radioactive Assay

Hacettepe Medical Journal, vol.21, no.3, pp.145-156, 1988 (Refereed Journals of Other Institutions)

Epidemiological and Practical Aspects of Enzyme Mediated Aminoglycoside Resistance

Hacettepe Medical Journal, vol.20, no.0, pp.185-189, 1987 (Refereed Journals of Other Institutions)

Refereed Congress / Symposium Publications in Proceedings

Gene expression analysis of thermoacidophilic archeaon Thermoplasma volcanium GSS1 under mild- and severe-pH stress conditions

BioMicroWorld2017 VII International Conference on Environmental, Industrial and Applied Microbiology, Madrid, Spain, 18 - 20 October 2017

Temperature dependent variations in oligomer status of an archaeal small heat shock protein, Tpv HSP14.3

BioMicroWorld2017 VII International conference on Environmental Industrial and Applied Microbiology, 18 - 20 October 2017

Gene expression profile of Thermoplasma volcanium GSS1 under mild and severe oxidative stress

40th Congress of the Federation-of-European-Biochemical-Societies (FEBS) - The Biochemical Basis of Life, Berlin, Germany, 4 - 09 July 2015, vol.282, pp.75 identifier

Importance of salt bridges in the dimer interface of Tpv sHSP14.3 for oligomere assembly and chaperone function

40th Congress of the Federation-of-European-Biochemical-Societies (FEBS) - The Biochemical Basis of Life, Berlin, Germany, 4 - 09 July 2015, vol.282, pp.332 identifier

Gene expression profiling of Thermoplasma volcanium under extreme stress conditions

European Biotechnology Congress, Edinburgh, Saint Helena, 22 - 26 June 2014

Heat-induced structural dynamics of a thermoacidophilic small heat-shock protein sHSP14.3; functional implications

38th Congress of the Federation-of-European-Biochemical-Societies (FEBS), Saint Peter, Guernsey And Alderney, 6 - 11 July 2013, vol.280, pp.139 identifier

Altered gene expression patterns of Thermoplasma volcanium 20S proteasome-VAT complex proteins in stress response

22nd IUBMB Congress/37th FEBS Congress, Sevilla, Spain, 4 - 09 September 2012, vol.279, pp.499-500 identifier

Determination of proteasome activity using surface enhanced raman scattering (SERS) spectroscopy

22nd IUBMB Congress/37th FEBS Congress, Sevilla, Spain, 4 - 09 September 2012, vol.279, pp.351 identifier

Application of SERS nanotag labeled probes for DNA studies

22nd IUBMB Congress/37th FEBS Congress, Sevilla, Spain, 4 - 09 September 2012, vol.279, pp.350-351 identifier

Genome-wide transcriptional response of the thermoacidophilic archaeon, Thermoplasma volcanium to environmental stress

22nd IUBMB Congress/37th FEBS Congress, Sevilla, Spain, 4 - 09 September 2012, vol.279, pp.501 identifier

Improving Protein Stability And Enzyme Recovery Under Stress Conditions By Use Of Recombinant Molecular Chaperones

14th International Biotechnology Symposium and Exhibition (IBS-2008), Rimini, Italy, 14 - 18 September 2010, vol.150 identifier

Cloning and Expression of Hsp20 Related Small Heat Shock Proteins of Thermoplasma volcanium

of 32rd FEBS Congress Molecular Machines, Vienna, Austria, 7 - 12 July 2007, pp.195

Differential expression of archaeal Hsp60 and CDC48 homologue VAT genes in heat shock

32nd Congress of the Federation-of-European-Biochemical-Societies (FEBS), Vienna, Austria, 7 - 12 July 2007, vol.274, pp.196 identifier

Differential expression of archaeal Hsp60 and CDC48 homologue VAT genes in heat-shock

32nd Congress of the Federation-of-European-Biochemical-Societies (FEBS), Vienna, Austria, 7 - 12 July 2007, vol.274, pp.195 identifier

Cloning and expression of Hsp20 related small heat shock proteins of Thermoplasma

32nd Congress of the Federation-of-European-Biochemical-Societies (FEBS), Vienna, Austria, 7 - 12 July 2007, vol.274, pp.195 identifier

Purification and characterization of archaeal 6xHis tagged recombinant proteases

31st Congress of the Federation-of-European-Biochemical-Societies (FEBS), İstanbul, Turkey, 24 - 29 June 2006, vol.273, pp.361 identifier

Cloning and expression of a pepstatin insensitive acid protease from Thermoplasma volcanium in E-coli

30th Congress of the Federation-of-European-Biochemical-Societies (FEBS)/9th IUBMB Conference, Budapest, Hungary, 2 - 07 July 2005, vol.272, pp.156 identifier

Programmed proteolytic machineries of Thermoplasma volcanium

20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress, Kyoto, Japan, 18 - 23 June 2006, pp.94

Cloning and expression of a pepstatin insensitive acid protease from T volcanium in E coli

30th FEBS Congress and 9th IUBMB Conference, The protein world Budapest, Budapest, Hungary, 2 - 07 June 2005, pp.156

Cloning of Citrate Synthase Gene from Thermoplasma volcanium

28th Meeting of the Federation of European Biochemical Societies, İstanbul, Turkey, 20 - 25 October 2002, pp.114

Cloning of Two Subunit Genes of Thermoplasma volcanium

28th Meeting of the Federation of European Biochemical Societies, İstanbul, Turkey, 20 - 25 October 2002, pp.114

Effects of Polyols on Thermal Stability of Citrate Synthase from Thermoplasma acidophilum

28th Meeting of the Federation of European Biochemical Societies, İstanbul, Turkey, 20 - 25 October 2002, vol.269, pp.113

A Thermophilic Extracellular Acid Protease from Thermoplasma volcanium

28th Meeting of the Federation of European Biochemical Societies, İstanbul, Turkey, 20 - 25 October 2002, vol.269, pp.113

Purification and Characterization of a Thermostable Serine protease from Thermoplasma volcanium

27th Meeting of the Federation of European Biochemical Societies, Lisbon, Portugal, 30 June - 05 July 2001, pp.193

20S Proteasome Complex fropm Thermoplasma volcanium

27th Meeting of the Federation of European Biochemical Societies, Lisbon, Portugal, 30 June - 05 July 2001, pp.199

Differential Amplification of 16S rDNA Sequences of Archaea and bacteria from Solfataric Hot Springs in Turkey

18th International Union of Biochemistry and Molecular Biology (IUBMB) Congress, Birmingham, United Kingdom, 16 - 20 July 2000, pp.550

The effects of external factors on the Activities of Mutant Thermoplasma Citrate Synthases

18th International Union of Biochemistry and Molecular Biology (IUBMB) Congress, Birmingham, United Kingdom, 16 - 20 July 2000, pp.1077

Effects of Glycine Substitutions in Subunit Interface Helices on Stability of Thermoplasma acidophilum Citrate Synthase

26th Meeting of the Federation of European Biochemical Societies, Nice, France, 19 - 24 June 1999, vol.81, pp.355

Induced CYPmRNA protein and catalytic activity in the liver microsomes of Lisa saliens

26th Meeting of the Federation of European Biochemical Societies., Nice, France, 19 - 24 June 1999, vol.81, pp.117

Thermostable Protease Activities of Thermoacidophilic Bacteria and Archaea Isolated from Natural Solfataric Hot Springs in Turkey

26th Meeting of the Federation of European Biochemical Societies, Nice, France, 19 - 24 June 1999, vol.81, pp.355

The Effect of Cysteine 43 Mutation on Catalytic Properties and Thermostability of Thermoplasma acidophilum Citrate Synthase

24th Meeting of the Federation of European Biochemical Societies, Barcelona, Spain, 7 - 12 July 1996, pp.24-25

Detaction of Hydrocarbon Degrading Genotypes of Pseudomonas sp by using PCR DNA Probe Assays

24th Meeting of the Federation of European Biochemical Societies (FEBS), Barcelona, Spain, 7 - 12 July 1996, vol.42, pp.3

Prevalence of Haloalkanoic Acid Dehalogenase Genotypes in Bacteria from Different Environments

NATO-ASI on ' Genome Structure and Function, Elba Island, Italy, 13 - 15 June 1996

Detection of Aminoglycoside 3 Phosphotransferases by Using DNA and Antibody Probes

.” 23rd Meeting of the Federation of European Biochemical Societies (FEBS), Basel, Switzerland, 13 - 18 August 1995, pp.136

Engineering of Citrate Synthase from Thermoplasma acidophilum by Site Directed Mutagenesis

23rd Meeting of the Federation of European Biochemical Societies (FEBS)., Basel, Switzerland, 13 - 18 August 1995, pp.295

Pseudomonas aeruginosa SES 938 I Elastase Some Properties as a Metalloneutral Proteinase

IUMS Congress´ 94: 7th International Congress of Bacteriology and Applied Microbiology Division, Prague, Czech Republic, 3 - 08 July 1994, pp.528

Cloning and Expression of a Haloacid Dehalogenase Gene from Pseudomonas sp Strain 19S

IUMS Congresses´ 94: 7th International Congress of Bacteriology and Applied Microbiology Division, Prague, 3 - 08 July 1994, pp.209

Isolation and Characterization of Elastase from Bacteria and Human Leukocyte

22nd FEBS Meeting, Stockholm, Sweden, 4 - 09 July 1993, vol.13, pp.246

Site Specific Mutations in the Analogous Nucleotide Binding Loop P Loop Motif of Aminoglycoside 3 Phosphotransferase II APH 3 II

Cold Spring Harbor Laboratory Meeting on Molecular Genetics of Bacteria and Phages., New York, United States Of America, 18 - 23 August 1992

Site Specific Mutations of Highly Conserved Residues in APH 3 II Phenotypic and Structural Analysis of Mutant Enzymes

92nd General Meeting of the American Society for Microbiology, New Orleans, United States Of America, 26 - 30 May 1992

Structure Function Analysis for Aminoglycoside 3 Phosphotransferase II APH 3 II

89th Annual Meeting of Southern Association of Agricultural Scientists, Biochemistry Division, Lexington, United States Of America, 1 - 05 February 1992

Kinetic Studies of Mutant Aminoglycoside 3 Phosphotransferase II APH 3 II Enzymes

31st Interscience Conference on Antimicrobial Agents and Chemotherpy (ICAAC)., Chicago, United States Of America, 29 September - 02 October 1991, pp.1361

Structure Activity Relationhips for Aminoglycoside 3 Phosphotransferase II Role of Tyrosine Residue 218 in Substrate Specificity

91st General Meeting of the American Society for Microbiology, Dallas, United States Of America, 5 - 09 May 1991, pp.95

Plasmid Mediated Dehalogenation of Halogenated Hydrocarbons by a Thermostable dehalogenase from a Pseudomonas sp

Summer School on Molecular Biology, " Global Regulation of Gene Expression in Microorganisms, Spetsai, Greece, 2 - 15 September 1990

Aminoglycoside Resistance Profiles of Gentamicin Resistant Strains of Enterobacteriaceae and Pseudomonas

15th International Congress of Chemotherapy, İstanbul, Turkey, 20 - 27 July 1987, pp.224

Plasmid Mediated Enzymatic Detoxification of Aminoglycoside Antibiotics in Clinical Isolates of Gram Negative Bacilli

15th International Congress of Chemotherapy, İstanbul, Turkey, 20 - 27 July 1987, pp.148

Books & Book Chapters

Moleküler Genetik Teknikleri

in: Moleküler Hücre Biyolojisi, Hikmet Geçkil, Murat Özmen, Özfer Yeşilada, Editor, Palme yayıncılık, pp.177-198, 2013