Publications & Works

Articles Published in Journals That Entered SCI, SSCI and AHCI Indexes

Using chains of bottleneck transitions to decompose and solve reinforcement learning tasks with hidden states

Future Generation Computer Systems, vol.133, pp.153-168, 2022 (Journal Indexed in SCI Expanded) identifier

Incremental multi-agent path finding

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE, vol.116, pp.220-233, 2021 (Journal Indexed in SCI) Sustainable Development identifier identifier

Effective feature reduction for link prediction in location-based social networks

JOURNAL OF INFORMATION SCIENCE, vol.45, pp.676-690, 2019 (Journal Indexed in SCI) identifier identifier

GENERATING EFFECTIVE INITIATION SETS FOR SUBGOAL-DRIVEN OPTIONS

ADVANCES IN COMPLEX SYSTEMS, vol.22, no.2, 2019 (Journal Indexed in SCI) identifier identifier

A context aware model for autonomous agent stochastic planning

ROBOTICS AND AUTONOMOUS SYSTEMS, vol.112, pp.137-153, 2019 (Journal Indexed in SCI) Sustainable Development identifier identifier

Effective induction of gene regulatory networks using a novel recommendation method

INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, vol.22, no.2, pp.91-112, 2019 (Journal Indexed in SCI) Sustainable Development identifier

Batch Mode TD(lambda) for Controlling Partially Observable Gene Regulatory Networks

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, vol.14, no.6, pp.1214-1227, 2017 (Journal Indexed in SCI) identifier identifier identifier

Making recommendations by integrating information from multiple social networks

APPLIED INTELLIGENCE, vol.45, no.4, pp.1047-1065, 2016 (Journal Indexed in SCI) Sustainable Development identifier identifier

Effective gene expression data generation framework based on multi-model approach

ARTIFICIAL INTELLIGENCE IN MEDICINE, vol.70, pp.41-61, 2016 (Journal Indexed in SCI) identifier identifier identifier

MOD* Lite: An Incremental Path Planning Algorithm Taking Care of Multiple Objectives

IEEE TRANSACTIONS ON CYBERNETICS, vol.46, no.1, pp.245-257, 2016 (Journal Indexed in SCI) identifier identifier

Toward Generalization of Automated Temporal Abstraction to Partially Observable Reinforcement Learning

IEEE TRANSACTIONS ON CYBERNETICS, vol.45, no.8, pp.1414-1425, 2015 (Journal Indexed in SCI) identifier identifier

Subtree selection in kernels for graph classification

INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, vol.8, no.3, pp.294-310, 2013 (Journal Indexed in SCI) identifier identifier identifier

Integrating machine learning techniques into robust data enrichment approach and its application to gene expression data

INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, vol.8, no.3, pp.247-281, 2013 (Journal Indexed in SCI) identifier identifier identifier

Revealing miRNA Regulation and miRNA Target Prediction Using Constraint-Based Learning

IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART C-APPLICATIONS AND REVIEWS, vol.42, no.6, pp.1354-1364, 2012 (Journal Indexed in SCI) identifier identifier

Formation preserving path finding in 3-D terrains

APPLIED INTELLIGENCE, vol.36, no.2, pp.348-368, 2012 (Journal Indexed in SCI) identifier identifier

Limited-Damage A*: A path search algorithm that considers damage as a feasibility criterion

KNOWLEDGE-BASED SYSTEMS, vol.24, no.4, pp.501-512, 2011 (Journal Indexed in SCI) identifier identifier

Influence of Prior Knowledge in Constraint-Based Learning of Gene Regulatory Networks

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, vol.8, no.1, pp.130-142, 2011 (Journal Indexed in SCI) identifier identifier identifier

Improving reinforcement learning by using sequence trees

MACHINE LEARNING, vol.81, no.3, pp.283-331, 2010 (Journal Indexed in SCI) Creative Commons License identifier identifier

Multi-agent real-time pursuit

AUTONOMOUS AGENTS AND MULTI-AGENT SYSTEMS, vol.21, no.1, pp.69-107, 2010 (Journal Indexed in SCI) identifier identifier

Automated Large-Scale Control of Gene Regulatory Networks

IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART B-CYBERNETICS, vol.40, no.2, pp.286-297, 2010 (Journal Indexed in SCI) identifier identifier identifier

Scalable approach for effective control of gene regulatory networks

ARTIFICIAL INTELLIGENCE IN MEDICINE, vol.48, no.1, pp.51-59, 2010 (Journal Indexed in SCI) identifier identifier identifier

Real-Time Moving Target Evaluation Search

IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART C-APPLICATIONS AND REVIEWS, vol.39, no.3, pp.366-372, 2009 (Journal Indexed in SCI) identifier identifier

A layered approach to learning coordination knowledge in multiagent environments

APPLIED INTELLIGENCE, vol.27, no.3, pp.249-267, 2007 (Journal Indexed in SCI) identifier identifier

Positive impact of state similarity on reinforcement learning performance

IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART B-CYBERNETICS, vol.37, no.5, pp.1256-1270, 2007 (Journal Indexed in SCI) identifier identifier identifier

RTTES: Real-time search in dynamic environments

APPLIED INTELLIGENCE, vol.27, no.2, pp.113-129, 2007 (Journal Indexed in SCI) identifier identifier

Real-time edge follow: A real-time path search approach

IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART C-APPLICATIONS AND REVIEWS, vol.37, no.5, pp.860-872, 2007 (Journal Indexed in SCI) identifier identifier

A powerful approach for effective finding of significantly differentially expressed genes

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, vol.3, no.3, pp.220-231, 2006 (Journal Indexed in SCI) identifier identifier identifier

Effectiveness of considering state similarity for reinforcement learning

INTELLIGENT DATA ENGINEERING AND AUTOMATED LEARNING - IDEAL 2006, PROCEEDINGS, vol.4224, pp.163-171, 2006 (Journal Indexed in SCI) identifier

Co-operation framework of case-based reasoning agents for automated product recommendation

JOURNAL OF EXPERIMENTAL & THEORETICAL ARTIFICIAL INTELLIGENCE, vol.17, no.3, pp.201-220, 2005 (Journal Indexed in SCI) identifier identifier

Data management research at the Middle East Technical University

SIGMOD RECORD, vol.34, no.3, pp.81-84, 2005 (Journal Indexed in SCI) identifier identifier

Multilevel graph partitioning: an evolutionary approach

JOURNAL OF THE OPERATIONAL RESEARCH SOCIETY, vol.56, no.5, pp.549-562, 2005 (Journal Indexed in SCI) identifier identifier

Views as first-class citizens in object-oriented databases

VLDB JOURNAL, vol.14, no.2, pp.155-169, 2005 (Journal Indexed in SCI) identifier identifier

Finding differentially expressed genes for pattern generation

BIOINFORMATICS, vol.21, no.4, pp.445-450, 2005 (Journal Indexed in SCI) Creative Commons License identifier identifier identifier

Multiple-agents to identify and separate touching digits in unconstrained handwritten Hindi numerals

JOURNAL OF EXPERIMENTAL & THEORETICAL ARTIFICIAL INTELLIGENCE, vol.15, no.4, pp.461-471, 2003 (Journal Indexed in SCI) identifier identifier

Chemoenzymatic synthesis of both enantiomers of 3-hydroxy-2,3-dihydro-4H-chromen-4-one

TETRAHEDRON-ASYMMETRY, vol.14, no.11, pp.1489-1493, 2003 (Journal Indexed in SCI) identifier identifier

Implementing agent communication for a multi-agent simulation infrastructure on HLA

COMPUTER AND INFORMATION SCIENCES - ISCIS 2003, vol.2869, pp.619-626, 2003 (Journal Indexed in SCI) identifier identifier

Rule-based schema evolution in object-oriented databases

KNOWLEDGE-BASED SYSTEMS, vol.16, no.1, pp.47-57, 2003 (Journal Indexed in SCI) identifier identifier

Learning intelligent behavior in a non-stationary and partially observable environment

ARTIFICIAL INTELLIGENCE REVIEW, vol.18, no.2, pp.97-115, 2002 (Journal Indexed in SCI) identifier identifier

Coordination of intelligent agents in real-time search

EXPERT SYSTEMS, vol.19, no.2, pp.80-87, 2002 (Journal Indexed in SCI) identifier identifier

Learning sequences of compatible actions among agents

ARTIFICIAL INTELLIGENCE REVIEW, vol.17, no.1, pp.21-37, 2002 (Journal Indexed in SCI) identifier identifier

Multiagent reinforcement learning using function approximation

IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART C-APPLICATIONS AND REVIEWS, vol.30, no.4, pp.485-497, 2000 (Journal Indexed in SCI) identifier identifier

Using object-oriented materialized views to answer selection-based complex queries

INFORMATION SCIENCES, vol.118, pp.75-99, 1999 (Journal Indexed in SCI) identifier identifier

A multi-agent tuple-space based problem solving framework

JOURNAL OF SYSTEMS AND SOFTWARE, vol.47, no.1, pp.11-17, 1999 (Journal Indexed in SCI) Sustainable Development identifier identifier

Incremental view maintenance in object-oriented databases

DATA BASE FOR ADVANCES IN INFORMATION SYSTEMS, vol.29, no.3, pp.52-64, 1998 (Journal Indexed in SCI) identifier identifier

View maintenance in object-oriented databases

DATABASE AND EXPERT SYSTEMS APPLICATIONS, vol.1134, pp.153-162, 1996 (Journal Indexed in SCI) identifier

Refereed Congress / Symposium Publications in Proceedings

LIMP: Incremental Multi-agent Path Planning with LPA*

14th International Conference on Agents and Artificial Intelligence (ICAART), ELECTR NETWORK, 3 - 05 February 2022, pp.208-215 identifier

Compact Frequency Memory for Reinforcement Learning with Hidden States.

PRIMA 2019: Principles and Practice of Multi-Agent Systems - 22nd International Conference, Taranto, Italy, 28 - 31 October 2019, pp.425-433 identifier identifier

Reducing Features to Improve Link Prediction Performance in Location Based Social Networks, Non-Monotonically Selected Subset from Feature Clusters

IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM), Vancouver, Canada, 27 - 30 August 2019, pp.809-815 identifier identifier

Landmark Based Reward Shaping in Reinforcement Learning with Hidden States

18th International Conference on Autonomous Agents and MultiAgent Systems (AAMAS), Montreal, Canada, 13 - 17 May 2019, pp.1922-1924 identifier identifier

Mining Individual Features to Enhance Link Prediction Efficiency in Location Based Social Networks

IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM), Barcelona, Spain, 28 - 31 August 2018, pp.920-925 Creative Commons License identifier

Using Transitional Bottlenecks to Improve Learning in Nearest Sequence Memory Algorithm

IEEE 29th International Conference on Tools with Artificial Intelligence (ICTAI), Massachusetts, United States Of America, 6 - 08 November 2017, pp.147-152 identifier identifier

A Concept Filtering Approach for Diverse Density to Discover Subgoals in Reinforcement Learning

IEEE 29th International Conference on Tools with Artificial Intelligence (ICTAI), Massachusetts, United States Of America, 6 - 08 November 2017, pp.1-5 identifier identifier

Autonomous Intelligent Agents and Multi-Agent Systems

International Symposium on Engineering, Artificial Intelligence and Applications (ISEAIA 2017), 1 - 03 November 2017

An Evolutionary Approach for Detecting Communities in Social Networks

Proceedings of the 2017 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining 2017 - ASONAM ’xx17, Sydney, Australia, 31 July - 03 August 2017

Local Roots A Tree Based Subgoal Discovery Method to Accelerate Reinforcement Learning

Machine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2016, 19 - 23 September 2016

A History Tree Heuristic to Generate Better Initiation Sets for Options in Reinforcement Learning

22nd European Conference on Artificial Intelligence (ECAI), Hague, Netherlands, 29 August - 02 September 2016, vol.285, pp.1644-1645 identifier identifier

Time Preference aware Dynamic Recommendation Enhanced with Location, Social Network and Temporal Information

8th IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM), San-Francisco, Costa Rica, 18 - 21 August 2016, pp.909-916 identifier

Examining Place Categories for Link Prediction in Location Based Social Networks

8th IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM), San-Francisco, Costa Rica, 18 - 21 August 2016, pp.976-979 Sustainable Development identifier

Inference of Gene Regulatory Networks Via Multiple Data Sources and a Recommendation Method

IEEE International Conference on Bioinformatics and Biomedicine, Washington, Kiribati, 9 - 12 November 2015, pp.661-664 identifier

Modeling Individuals and Making Recommendations Using Multiple Social Networks

IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM), Paris, France, 25 - 28 August 2015, pp.1184-1191 identifier identifier

Memory Efficient Factored Abstraction for Reinforcement Learning

IEEE 2nd International Conference on Cybernetics (CYBCONF), Gdynia, Poland, 24 - 26 June 2015, pp.18-23 identifier

Multi-Objective Optimization Based Location and Social Network Aware Recommendation

10th IEEE International Conference on Collaborative Computing Networking Applications and Worksharing, Florida, United States Of America, 22 - 25 October 2014, pp.233-242 Creative Commons License identifier identifier

Contextual Feature Analysis to Improve Link Prediction for Location Based Social Networks

Proceedings of the 8th Workshop on Social Network Mining and Analysis - SNAKDD'14, New York, NY, USA, 24 - 27 August 2014

Cluster validity analysis using subsampling

SMC'03 Conference Proceedings. 2003 IEEE International Conference on Systems, Man and Cybernetics. Conference Theme - System Security and Assurance (Cat. No.03CH37483), Washington, DC, USA, 5 - 08 August 2003

Trust Based Recommendation Systems

IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM), Niagara Falls, Canada, 25 - 28 August 2013, pp.1267-1274 identifier

Effective Enrichment of Gene Expression Data Sets

11th IEEE International Conference on Machine Learning and Applications (ICMLA), Florida, United States Of America, 12 - 15 December 2012, pp.76-81 identifier identifier

Abstraction in Model Based Partially Observable Reinforcement Learning using Extended Sequence Trees

11th IEEE/WIC/ACM International Joint Conference on Web Intelligence and Intelligent Agent Technology (WI-IAT), Macau, China, 4 - 07 December 2012, pp.348-355 identifier identifier

A Multi-Objective Incremental Path Planning Algorithm for Mobile Agents

11th IEEE/WIC/ACM International Joint Conference on Web Intelligence and Intelligent Agent Technology (WI-IAT), Macau, China, 4 - 07 December 2012, pp.401-408 identifier identifier

Partially Observable Gene Regulatory Network Control Without a Boundary on Horizon

IEEE 24th International Conference on Tools with Artificial Intelligence (ICTAI), Athens, Greece, 7 - 09 November 2012, pp.81-88 identifier identifier

Employing Machine Learning Techniques for Data Enrichment: Increasing the number of samples for effective gene expression data analysis

IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Georgia, United States Of America, 12 - 15 November 2011, pp.238-242 identifier identifier

Reengineering relational databases to object oriented constructing the class hierarchy and migrating the data

Proceedings Eighth Working Conference on Reverse Engineering, Stuttgart, Germany, 2 - 05 October 2001

Feature Selection for Graph Kernels

IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Hong Kong, Hong Kong, 18 - 21 December 2010, pp.632-637 identifier

Derivation of Transcriptional Regulatory Relationships by Partial Least Squares Regression

IEEE International Conference on Bioinformatics and Biomedicine (BIBMW 2009), Washington, Kiribati, 1 - 04 November 2009, pp.88-89 identifier identifier

Large-Scale Approximate Intervention Strategies for Probabilistic Boolean Networks as Models of Gene Regulation

8th IEEE International Conference on Bioinformatics and Bioengineering, Athens, Greece, 8 - 10 October 2008, pp.296-297 identifier identifier

Combining Multiple Types of Biological Data in Constraint-Based Learning of Gene Regulatory Networks

IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, Idaho, United States Of America, 15 - 17 September 2008, pp.131-132 identifier identifier

FORMATION PRESERVING NAVIGATION OF AGENT TEAMS IN 3-D TERRAINS

6th International Industrial Simulation Conference, Lyon, France, 9 - 11 June 2008, pp.148-155 identifier

Real-Time Moving Target Search

10th Pacific Rim International Conference on Multi-Agent Systems, Bangkok, Thailand, 21 - 23 November 2007, vol.5044, pp.110-111 identifier

Feature reduction for gene regulatory network control

7th IEEE International Conference on Bioinformatics and Bioengineering, Massachusetts, United States Of America, 14 - 17 October 2007, pp.1260-1261 identifier identifier

State Similarity Based Approach for Improving Performance in RL

20th International Joint Conference on Artificial Intelligence, Hyderabad, Pakistan, 6 - 12 January 2007, pp.817-822 identifier identifier

Asymptotical lower limits on required number of examples for learning boolean networks

21st International Symposium on Computer and Information Sciences (ISCIS 2006), İstanbul, Turkey, 1 - 03 November 2006, vol.4263, pp.154-164 identifier identifier

Optimal multi-objective control method for discrete genetic regulatory networks

6th IEEE Syposium on BioInformatics and BioEngineering (BIBE 2006), Virginia, United States Of America, 16 - 18 October 2006, pp.281-282 identifier identifier

Learning by Automatic Option Discovery from Conditionally Terminating Sequences

17th European Conference on Artificial Intelligence, Riva del Garda, Italy, 28 August 2006, vol.141, pp.494-495 identifier

Option discovery in reinforcement learning using frequent common subsequences of actions

International Conference on Computational Intelligence for Modelling, Control and Automation/International Conference on Intelligent Agents Web Technologies and International Commerce, Vienna, Austria, 28 - 30 November 2005, pp.371-372 identifier identifier

Markov Decision Processes Based Optimal Control Policies for Probabilistic Boolean Networks

BIBE '04 Proceedings of the 4th IEEE Symposium on Bioinformatics and Bioengineering, 19 - 21 May 2004

Efficient Automated Mining of Fuzzy Association Rules

13th International Conference, DEXA 2002 Aix-en-Provence, France, September 2–6, 2002 Proceedings, 2 - 06 September 2002

Real Time Edge Follow A New Paradigm to Real Time Path Search

International Conference on Intelligent Games and Simulation (GAME-ON 2001), 30 November - 01 December 2001

Alternative Plan Generation methods for Multiple Query Optimization

13th International Symposium on Computer and Information Sciences (ISCIS 98), BELEK ANTALYA, Turkey, 26 - 28 October 1998, vol.53, pp.246-253 identifier

Books & Book Chapters

An Evolutionary Approach for Detecting Communities in Social Networks

in: From Security to Community Detection in Social Networking Platforms, , Editor, Springer, pp.17-44, 2019

Expert Reports