Education Information

Doctorate, Koc University, Instıtute Of Scıence, Hesaplamalı Bilimler Ve Mühendislik (Dr), Turkey 2007 - 2010
Postgraduate, Koc University, Instıtute Of Scıence, Hesaplamalı Bilimler Ve Mühendislik (Yl) (Tezli), Turkey 2005 - 2007
Undergraduate, Istanbul Technical University, Kimya-Metalurji Fakültesi, Kimya Mühendisliği Bölümü, Turkey 2000 - 2005

Dissertations

Doctorate, Multi-scale analysis and prediction of protein-protein interactions, Koç Üniversitesi, Hesaplamalı Bilimler Ve Mühendislik (Dr), 2010
Postgraduate, Characterization and analysis of protein-protein interfaces, Koç Üniversitesi, Hesaplamalı Bilimler Ve Mühendislik (Yl) (Tezli), 2007

Research Areas

Computer Sciences, bioinformatics, Biocomputing, Life Sciences, Bioinformatics, Biological Information, Natural Sciences, Engineering and Technology

Academic Titles / Tasks

Associate Professor, Middle East Technical University, Graduate School Of Informatics, 2019 - Continues
Assistant Professor, Middle East Technical University, Graduate School Of Informatics, Medical Informatics, 2016 - 2019
Lecturer PhD, Middle East Technical University, Graduate School Of Informatics, 2014 - 2016
Research Assistant, Massachusetts Institute of Technology, School Of Engıneerıng, Bıologıcal Engıneerıng, 2010 - 2014
Research Assistant, Koc University, Instıtute Of Scıence, Hesaplamalı Bilimler Ve Mühendislik (Dr), 2005 - 2010

Courses

Programming for Informatics, Postgraduate, 2018 - 2019, 2019 - 2020
Biological Databases and Data Analysis Tools, Postgraduate, 2019 - 2020
Structural Bioinformatics, Postgraduate, 2018 - 2019

Advising Theses

TUNÇBAĞ N., Prediction of the effects of single amino acid variations on protein functionality with structural and annotation centric modeling, Postgraduate, F.Cankara(Student), 2020
Özcengiz G., Tunçbağ N., Biological network modeling based on differentially expressed proteins in a bacilysin-deficient strain of Bacillus subtilis, Postgraduate, M.Kutnu(Student), 2019
TUNÇBAĞ N., Integrative Network Modelling Of The Dasatinib Treatment In Glioblastoma Stem Cells, Postgraduate, G.SENGER(Student), 2019
Tunçbağ N., Modeling the tumor specific network rewiring by integrating alternative splicing events with structural interactome, Postgraduate, H.CANSU(Student), 2019
Tunçbağ N., 3D spatial organization and network-guided comparison of mutation profiles in glioblastoma, Postgraduate, C.DİNÇER(Student), 2019
TUNÇBAĞ N., Structural mapping and network analysis of patient-specific mutations in glioblastoma, Postgraduate, T.KAYA(Student), 2018
SOMEL M., TUNÇBAĞ N., Transcriptomic network analysis of brain aging and alzheimers disease, Postgraduate, P.Parvizi(Student), 2017
TUNÇBAĞ N., SOMEL M., Transcriptomic network analysis of brain aging and Alzheimer's disease, Postgraduate, P.PARVIZI(Student), 2017
TUNÇBAĞ N., AYDIN SON Y., Reconstruction of the temporal signaling network in salmonella infected human cells, Postgraduate, G.BUDAK(Student), 2016

Designed Lessons

Tunçbağ N., Structural Bioinformatics, Postgraduate, 2016 - 2017
Tunçbağ N., Programming for Informatics, Postgraduate, 2014 - 2015

Articles Published in Journals That Entered SCI, SSCI and AHCI Indexes

Articles Published in Other Journals

Books & Book Chapters

Refereed Congress / Symposium Publications in Proceedings

Supported Projects

Tunçbağ N., Özlü N., TÜBİTAK International Multi-Cooperation Project, Serebral Kortikal Bozuklukların Çoklu-Omiks Ile Araştırılması, 2019 - 2022
MUYAN M., RAZIZADEH N., TUNÇBAĞ N., Project Supported by Higher Education Institutions, Östrojen sinyali tarafından tetiklenen epigenetik değişikliklerde rol oynayan protein ağlarının belirlenmesi ve modellenmesi, 2018 - 2019
TUNÇBAĞ N., TUBITAK Project, Multi dimensional modelling of the disease networks in atomic detail by data integration across several cancer types, 2014 - 2016

Memberships / Tasks in Scientific Organizations

Türkiye Proteomik Derneği, Executive Board Member, 2017 - Continues
International Society for Computational Biology, Member, 2007 - Continues

Scientific Refereeing

BMC BIOINFORMATICS, Journal Indexed in SCI-E, November 2019
PLOS COMPUTATIONAL BIOLOGY, Journal Indexed in SCI-E, October 2019
BIOINFORMATICS, SCI Journal, October 2019

Tasks In Event Organizations

Tunçbağ N., Özlü N., 3. Ulusal Proteomik Kongresi, Scientific Congress, İstanbul, Turkey, Şubat 2020
Tunçbağ N., The International Symposium on Health Informatics and Bioinformatics, (HIBIT), Scientific Congress, Antalya, Turkey, Ekim 2018
Tunçbağ N., The International Symposium on Health Informatics and Bioinformatics, (HIBIT) , Scientific Congress, Güzelyurt, Cyprus (Kktc), Haziran 2017
Tunçbağ N., ACM Conference on Bioinformatics, Computational Biology and Health Informatics, Scientific Congress, Washington, United States Of America, Ekim 2016
Tunçbağ N., ACM Conference on Bioinformatics, Computational Biology and Health Informatics, Scientific Congress, Georgia, United States Of America, Eylül 2015
Tunçbağ N., ACM Conference on Bioinformatics, Computational Biology and Health Informatics, Scientific Congress, California, United States Of America, Eylül 2014

Edit Congress and Symposium Activities

HIBIT 2019, Invited Speaker, İzmir, Turkey, 2019
X Annual Congress of the European Proteomics Association, Invited Speaker, İstanbul, Turkey, 2016

Citations

Total Citations (WOS):1572
h-index (WOS):18

Invited Talks

Personalized Medicine Guided by Integrative Network Modeling, Seminar, National Institutes of Health, United States Of America, August 2019
Precision Medicine Guided by Network Modeling, Seminar, National Cancer Institute, United States Of America, August 2019
From proteins/genes to functional networks and beyond, Seminar, Universitaet Zürich (University of Zürich), Switzerland, October 2015

Awards

Tunçbağ N., TÜSEB Teşvik Ödülü, Tüseb, October 2019
Tunçbağ N., International Rising Talent, Unesco-L'oreal Foundation, March 2019
Tunçbağ N., GEBİP, Türkiye Bilimler Akademisi, December 2018
Tunçbağ N., UNESCO-L’Oréal Ulusal Genç Bilim Kadınlarına Destek Ödülü, Unesco-L’Oréal, May 2018
TUNÇBAĞ N., Parlar Vakfı Genç Araştırmacı Ödülü, Parlar Vakfı, December 2017
TUNÇBAĞ N., BAGEP Ödülü, Bilim Akademisi, May 2015